Links of Interest

Molecule Pages: A comprehensive signaling database (http://www.signaling-gateway.org/molecule/)

MEROPS, the Peptidase Database (http://merops.sanger.ac.uk/)

Systems Biology Markup Language: http://sbml.org

Signal Transduction Knowledge Environment: http://stke.sciencemag.org/

Molecular Systems Biology: http://www.nature.com/msb/

European Bioinformatics Institute: Database of Annotated Published Models: http://www.ebi.ac.uk/biomodels

GENESIS: http://www.genesis-sim.org/GENESIS/

The SBML ODE Solver Library: http://www.tbi.univie.ac.at/~raim/odeSolver/

SUNDIALS (SUite of Nonlinear and DIfferential/ALgebraic equation Solvers): http://www.llnl.gov/CASC/sundials/

Systems Biology Toolbox for MATLAB: http://www.sbtoolbox.org/

Max Planck Institute Systems Biology Group: http://www.mpi-magdeburg.mpg.de/research/groups/sb

KEGG's human coagulation cascade: http://www.genome.jp/dbget-bin/www_bget?path:hsa04610

Reactome, a curated knowledgebase of biological pathways: http://www.reactome.com/

Reactome's Hemostasis page: http://www.reactome.org/cgi-bin/eventbrowser_st_id?ST_ID=REACT_604.1

BRENDA, the Enzyme Database: http://www.brenda.uni-koeln.de/

The NIBIB's Multi-Scale Modeling Intitiative: http://www.nibib.nih.gov/Research/MultiscaleModeling

BioSPICE (Simulation Program for Intra- and Inter-Cell Processes): https://biospice.org/index.php